bbtools software package bbduk.sh and repair.sh tools (SourceForge net)
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SourceForge net
bbtools software package bbduk.sh and repair.sh tools
Bbtools Software Package Bbduk.Sh And Repair.Sh Tools, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbtools+package/bbtools+bbduk/pmc11087805__pnas__2321836121__sapp-70-14-18
Average 90 stars, based on 1 article reviews
Bbtools Software Package Bbduk.Sh And Repair.Sh Tools, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbtools+package/bbtools+bbduk/pmc11087805__pnas__2321836121__sapp-70-14-18
Average 90 stars, based on 1 article reviews
bbtools software package bbduk.sh and repair.sh tools - by Bioz Stars,
2026-10
90/100 stars
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other:Article Title: Organizing the Global Diversity of Microviruses Article Snippet: SRA files from human, ocean, freshwater, soil, and ocean ( , , ) metagenomes ( ) were downloaded and extracted using the NCBI SRA toolkit and processed using repair.sh and bbduk.sh (with options ktrim=r k=23 mink=11 hdist=1 qtrim=r trimq=10 minlen=100) from the Plasmid Preparation:Article Title: Identifying candidate genes for sugar accumulation in sugarcane: an integrative approach Article Snippet: Sequencing was performed on the PacBio® Sequel platform (Pacific Biosciences) at the Arizona Genomics Institute (AGI, Tucson, AZ, USA). .. The vector and Escherichia coli genomic sequences were removed with the Genomic Sequencing:Article Title: Identifying candidate genes for sugar accumulation in sugarcane: an integrative approach Article Snippet: Sequencing was performed on the PacBio® Sequel platform (Pacific Biosciences) at the Arizona Genomics Institute (AGI, Tucson, AZ, USA). .. The vector and Escherichia coli genomic sequences were removed with the Sequencing:Article Title: Bacterial diversity and community structure shapes pederin polymorphism but lacks association with host genotype specificity in the rove beetle, Paederus fuscipes. Article Snippet: Paederus beetles are notorious for their irritant haemolymph toxin pederin, which is synthesised by an unculturable bacterial symbiont, causing dermatitis when in contact with human skin.. Pederin polymorphism is observed when (+) females carrying the toxin pederin and (−) females lacking this co-occur in natural populations.. Despite reports detecting pederin polymorphism in several Paederina beetles, symbiont infection frequencies in their natural populations and the bacterial diversity differences underlying the polymorphism between these female types are understudied. Article Title: Novel and unusual genes for nitrogen and metal cycling in Planctomycetota - and KSB1-affiliated metagenome-assembled genomes reconstructed from a marine subsea tunnel Article Snippet: .. Briefly, Illumina NovaSeq6000 sequencing generated 150 bp paired-end reads, which were normalized to 100 × coverage using BBNorm in the Amplification:Article Title: Contrasting diversity patterns of prokaryotes and protists over time and depth at the San-Pedro Ocean Time series Article Snippet: .. Amplicon sequences were then split into 16S and 18S pools using bbsplit.sh from the Derivative Assay:Article Title: Contrasting diversity patterns of prokaryotes and protists over time and depth at the San-Pedro Ocean Time series Article Snippet: .. Amplicon sequences were then split into 16S and 18S pools using bbsplit.sh from the Generated:Article Title: Novel and unusual genes for nitrogen and metal cycling in Planctomycetota - and KSB1-affiliated metagenome-assembled genomes reconstructed from a marine subsea tunnel Article Snippet: .. Briefly, Illumina NovaSeq6000 sequencing generated 150 bp paired-end reads, which were normalized to 100 × coverage using BBNorm in the |